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OGN osteoglycin [ Coturnix japonica (Japanese quail) ]

Gene ID: 107319663, updated on 14-Mar-2024

Summary

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Gene symbol
OGN
Gene description
osteoglycin
See related
Ensembl:ENSCJPG00005012247
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Also known as
Mimecan
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See OGN in Genome Data Viewer
Location:
chromosome: 12
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 12 NC_029527.1 (2171060..2179288)

Chromosome 12 - NC_029527.1Genomic Context describing neighboring genes Neighboring gene centromere protein P Neighboring gene asporin Neighboring gene osteomodulin Neighboring gene nucleolar protein 8 Neighboring gene small nucleolar RNA SNORA84 Neighboring gene isoleucyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029527.1 Chromosome 12 Reference Coturnix japonica 2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and relative tissue expression of keratocan and mimecan in embryonic quail cornea. Corpuz LM, et al. Matrix Biol, 2000 Dec. PMID 11102758
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mimecan
Names
keratan sulfate proteoglycan mimecan

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323222.1 → NP_001310151.1  mimecan precursor

    Status: PROVISIONAL

    Source sequence(s)
    AF128224
    UniProtKB/Swiss-Prot
    Q9DE65
    UniProtKB/TrEMBL
    A0A8C2TJZ4
    Related
    ENSCJPP00005014702.1, ENSCJPT00005020882.1
    Conserved Domains (4) summary
    sd00031
    Location:118 → 139
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:262 → 286
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:208 → 246
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:182 → 241
    LRR_8; Leucine rich repeat

RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029527.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    2171060..2179288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9DE65.1 GenPept UniProtKB/Swiss-Prot:Q9DE65

Gene LinkOut

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