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NOTCH1 notch receptor 1 [ Coturnix japonica (Japanese quail) ]

Gene ID: 107321700, updated on 14-Mar-2024

Summary

Gene symbol
NOTCH1
Gene description
notch receptor 1
See related
Ensembl:ENSCJPG00005008142
Gene type
protein coding
RefSeq status
MODEL
Organism
Coturnix japonica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
Orthologs
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Genomic context

See NOTCH1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Coturnix japonica 2.1 (GCF_001577835.2) 17 NC_029532.1 (6304784..6339593)

Chromosome 17 - NC_029532.1Genomic Context describing neighboring genes Neighboring gene EGF like domain multiple 7 Neighboring gene uncharacterized LOC107321690 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene inositol polyphosphate-5-phosphatase E

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029532.1 Chromosome 17 Reference Coturnix japonica 2.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding PubMed 
enables calcium ion binding PubMed 
enables signaling receptor activity PubMed 
Component Evidence Code Pubs
located_in membrane PubMed 

General protein information

Preferred Names
neurogenic locus notch homolog protein 1
Names
notch 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Coturnix japonica 2.1 Primary Assembly

Genomic

  1. NC_029532.1 Reference Coturnix japonica 2.1 Primary Assembly

    Range
    6304784..6339593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015878847.1XP_015734333.1  neurogenic locus notch homolog protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2T728
    Related
    ENSCJPP00005009359.1, ENSCJPT00005014000.1
    Conserved Domains (9) summary
    smart00004
    Location:14421479
    NL; Domain found in Notch and Lin-12
    cd00054
    Location:945981
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00204
    Location:19222034
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00066
    Location:14871522
    Notch; LNR domain
    pfam06816
    Location:15671618
    NOD; NOTCH protein
    pfam07684
    Location:16711727
    NODP; NOTCH protein
    pfam11936
    Location:24742535
    DUF3454; Domain of unknown function (DUF3454)
    pfam12796
    Location:19322025
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:18801925
    ANK; ANK repeat [structural motif]
  2. XM_015878848.1XP_015734334.1  neurogenic locus notch homolog protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2T728
    Conserved Domains (9) summary
    smart00004
    Location:13961433
    NL; Domain found in Notch and Lin-12
    cd00054
    Location:945981
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00204
    Location:18761988
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00066
    Location:14411476
    Notch; LNR domain
    pfam06816
    Location:15211572
    NOD; NOTCH protein
    pfam07684
    Location:16251681
    NODP; NOTCH protein
    pfam11936
    Location:24282489
    DUF3454; Domain of unknown function (DUF3454)
    pfam12796
    Location:18861979
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:18341879
    ANK; ANK repeat [structural motif]
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