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pnp4b purine nucleoside phosphorylase 4b [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107379238, updated on 14-Mar-2024

Summary

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Gene symbol
pnp4b
Gene description
purine nucleoside phosphorylase 4b
See related
Ensembl:ENSNFUG00015019852
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Also known as
PNP
Orthologs
zebrafish all
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Genomic context

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See pnp4b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539917.1 (45600171..45603278)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr05 NC_029653.1 (52932411..52935595)

NW_026539917.1Genomic Context describing neighboring genes Neighboring gene IQ motif containing GTPase activating protein 3 Neighboring gene uncharacterized LOC107379235 Neighboring gene ankyrin repeat domain-containing protein 34A Neighboring gene 2,4-dienoyl CoA reductase 1, mitochondrial Neighboring gene phosphomevalonate kinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogeny, genetic variability and colour polymorphism of an emerging animal model: the short-lived annual Nothobranchius fishes from southern Mozambique. Dorn A, et al. Mol Phylogenet Evol, 2011 Dec. PMID 21708276
  2. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables purine-nucleoside phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleoside metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
purine nucleoside phosphorylase 4b
NP_001310719.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323790.1 → NP_001310719.1  purine nucleoside phosphorylase 4b

    Status: PROVISIONAL

    Source sequence(s)
    JN585149
    UniProtKB/TrEMBL
    A0A1A8B5L3, G3LZY0
    Conserved Domains (2) summary
    COG0005
    Location:25 → 286
    XapA; Purine nucleoside phosphorylase [Nucleotide transport and metabolism]
    PRK08202
    Location:12 → 286
    PRK08202; purine nucleoside phosphorylase; Provisional

RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539917.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    45600171..45603278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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