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ghitm growth hormone inducible transmembrane protein [ Nothobranchius furzeri (turquoise killifish) ]

Gene ID: 107387813, updated on 14-Mar-2024

Summary

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Gene symbol
ghitm
Gene description
growth hormone inducible transmembrane protein
See related
Ensembl:ENSNFUG00015008559
Gene type
protein coding
RefSeq status
MODEL
Organism
Nothobranchius furzeri
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
Orthologs
human zebrafish all
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Genomic context

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See ghitm in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539926.1 (19760132..19766747)
100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr12 NC_029660.1 (23129021..23135639, complement)

NW_026539926.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129166503 Neighboring gene carbohydrate (chondroitin 6) sulfotransferase 3b Neighboring gene cadherin-related family member 1 Neighboring gene leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogeny, genetic variability and colour polymorphism of an emerging animal model: the short-lived annual Nothobranchius fishes from southern Mozambique. Dorn A, et al. Mol Phylogenet Evol, 2011 Dec. PMID 21708276
  2. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
growth hormone-inducible transmembrane protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UI_Nfuz_MZM_1.0 Primary Assembly

Genomic

  1. NW_026539926.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Range
    19760132..19766747
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015963008.2 → XP_015818494.1  growth hormone-inducible transmembrane protein

    UniProtKB/TrEMBL
    A0A1A8A083, A0A8C6LEU5
    Related
    ENSNFUP00015017937.1
    Conserved Domains (1) summary
    cd10431
    Location:99 → 346
    GHITM; Growth-hormone inducible transmembrane protein

  2. XM_015963009.2 → XP_015818495.1  growth hormone-inducible transmembrane protein

    UniProtKB/TrEMBL
    A0A1A8A083, A0A8C6LEU5
    Conserved Domains (1) summary
    cd10431
    Location:99 → 346
    GHITM; Growth-hormone inducible transmembrane protein
Nucleotide Protein
Heading Accession and Version

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