U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC02935 long intergenic non-protein coding RNA 2935 [ Homo sapiens (human) ]

Gene ID: 107984158, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
LINC02935provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2935provided by HGNC
Primary source
HGNC:HGNC:55939
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LINC02935 in Genome Data Viewer
Location:
10q25.2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (112891032..112927938)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene uncharacterized LOC124902503 Neighboring gene microRNA 4295 Neighboring gene Sharpr-MPRA regulatory region 921 Neighboring gene Sharpr-MPRA regulatory region 3692 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr10:114492107-114492608 Neighboring gene Sharpr-MPRA regulatory region 7283 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:114563987-114564486 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:114570610-114571310 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:114571311-114572009 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:114572010-114572709 Neighboring gene uncharacterized LOC103344931 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4068 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:114658623-114659435 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:114661023-114661523 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:114672820-114673320 Neighboring gene MPRA-validated peak1093 silencer Neighboring gene uncharacterized LOC124902502 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:114717259-114717893 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:114722581-114723081 Neighboring gene Sharpr-MPRA regulatory region 3715 Neighboring gene Sharpr-MPRA regulatory region 6419 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2835 Neighboring gene transcription factor 7 like 2 Neighboring gene ribosomal protein S15a pseudogene 30

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000010.11 Chromosome 10 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

General gene information

Go to the top of the page Help

Clone Names

  • AL158212.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    112891032..112927938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747706.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases