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LOC107984202 uncharacterized LOC107984202 [ Homo sapiens (human) ]

Gene ID: 107984202, updated on 22-Oct-2024

Summary

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Gene symbol
LOC107984202
Gene description
uncharacterized LOC107984202
See related
Ensembl:ENSG00000288915
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984202 in Genome Data Viewer
Location:
10p15.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (6492469..6493376)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (6491938..6493500)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2656 Neighboring gene uncharacterized LOC124902370 Neighboring gene NANOG hESC enhancer GRCh37_chr10:6452056-6452557 Neighboring gene protein kinase C theta Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_13978 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14068 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14123 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2968 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_14215 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2108 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2109 Neighboring gene Sharpr-MPRA regulatory region 12587 Neighboring gene PRKCQ antisense RNA 1 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:6671711-6672282 Neighboring gene long intergenic non-protein coding RNA 2648

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    6492469..6493376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001747350.2 RNA Sequence

    Related
    ENST00000784846.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    6491938..6493500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007080946.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases