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LOC107984322 uncharacterized LOC107984322 [ Homo sapiens (human) ]

Gene ID: 107984322, updated on 22-Oct-2024

Summary

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Gene symbol
LOC107984322
Gene description
uncharacterized LOC107984322
See related
Ensembl:ENSG00000255375
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107984322 in Genome Data Viewer
Location:
11p13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (32136836..32143723)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3220 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr11:32113833-32114554 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4562 Neighboring gene eukaryotic translation initiation factor 4A2 pseudogene 5 Neighboring gene reticulocalbin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4563 Neighboring gene thioesterase superfamily member 7, pseudogene Neighboring gene small nucleolar RNA, H/ACA box 88 Neighboring gene HCNE2 enhancer upstream of PAX6 Neighboring gene ReSE screen-validated silencer GRCh37_chr11:32380174-32380395 Neighboring gene WT1 3' enhancer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3221 Neighboring gene WT1 intron 3 regulatory region Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:32449464-32450078 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr11:32450079-32450691 Neighboring gene WT1/WT1-AS bi-directional promoter region Neighboring gene WT1 transcription factor Neighboring gene WT1 antisense RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000011.10 Chromosome 11 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

    Range
    32136836..32143723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001748165.2 RNA Sequence

    Related
    ENST00000667553.2
Nucleotide Protein
Heading Accession and Version

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