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LOC107985100 suppressyn-like [ Homo sapiens (human) ]

Gene ID: 107985100, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107985100
Gene description
suppressyn-like
Gene type
pseudo
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC107985100 in Genome Data Viewer
Location:
1q44
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (246636534..246637045, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (246058539..246059050, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene consortin, connexin sorting protein Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:246797385-246798584 Neighboring gene endogenous retrovirus group 48 member 1, envelope pseudogene Neighboring gene ribosomal protein L7a pseudogene 82 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:246810364-246811563 Neighboring gene MPRA-validated peak817 silencer Neighboring gene uncharacterized LOC102724382 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:246853136-246853656 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2858 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2035 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2036 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2037 Neighboring gene MPRA-validated peak819 silencer Neighboring gene saccharopine dehydrogenase (putative) Neighboring gene ReSE screen-validated silencer GRCh37_chr1:246917324-246917474 Neighboring gene ribosomal protein L35a pseudogene 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General gene information

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Homology

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    246636534..246637045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    246058539..246059050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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