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LOC107986261 uncharacterized LOC107986261 [ Homo sapiens (human) ]

Gene ID: 107986261, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986261
Gene description
uncharacterized LOC107986261
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986261 in Genome Data Viewer
Location:
4p15.32
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (16113876..16120904, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15964828-15965669 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:15982103-15982696 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:15982697-15983289 Neighboring gene fibroblast growth factor binding protein 2 Neighboring gene prominin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene Sharpr-MPRA regulatory region 9620 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:16069501-16070094 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:16078051-16078768 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:16078769-16079486 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21346 Neighboring gene uncharacterized LOC105374502 Neighboring gene uncharacterized LOC107986187 Neighboring gene transmembrane anterior posterior transformation 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000004.12 Chromosome 4 Reference GRCh38.p14 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    16113876..16120904 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001741596.2 RNA Sequence

  2. XR_001741597.2 RNA Sequence

  3. XR_001741595.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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