U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC107986262 uncharacterized LOC107986262 [ Homo sapiens (human) ]

Gene ID: 107986262, updated on 17-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
LOC107986262
Gene description
uncharacterized LOC107986262
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC107986262 in Genome Data Viewer
Location:
4p15.31
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (18167665..18226765)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (18150018..18209119)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ligand dependent nuclear receptor corepressor like Neighboring gene keratin 18 pseudogene 63 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15313 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15314 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21357 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21358 Neighboring gene uncharacterized LOC107986220 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:18160933-18161439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21359 Neighboring gene uncharacterized LOC105374510 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:18631748-18632248 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:18693291-18694224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21360 Neighboring gene uncharacterized LOC107986263 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21361 Neighboring gene NANOG hESC enhancer GRCh37_chr4:19012316-19012830

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    18167665..18226765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001741598.1 RNA Sequence

  2. XR_001741599.2 RNA Sequence

  3. XR_001741600.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    18150018..18209119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074510.1 RNA Sequence

  2. XR_007074511.1 RNA Sequence

  3. XR_007074512.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases