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LOC107986860 endogenous retrovirus group K member 19 Env polyprotein-like [ Homo sapiens (human) ]

Gene ID: 107986860, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986860
Gene description
endogenous retrovirus group K member 19 Env polyprotein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986860 in Genome Data Viewer
Location:
7q36.1
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (150549075..150564102, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (151727398..151742384, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26834 Neighboring gene GTPase, IMAP family member 7 Neighboring gene aldehyde dehydrogenase 7 family member A1 pseudogene 3 Neighboring gene GTPase, IMAP family member 4 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26835 Neighboring gene eukaryotic translation initiation factor 2A pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

General protein information

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Preferred Names
endogenous retrovirus group K member 19 Env polyprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    150549075..150564102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017012936.2 → XP_016868425.1  endogenous retrovirus group K member 19 Env polyprotein-like

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    151727398..151742384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047445004.1 → XP_047300960.1  endogenous retrovirus group K member 19 Env polyprotein-like

Nucleotide Protein
Heading Accession and Version

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