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LOC107986976 uncharacterized LOC107986976 [ Homo sapiens (human) ]

Gene ID: 107986976, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107986976
Gene description
uncharacterized LOC107986976
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107986976 in Genome Data Viewer
Location:
8q24.22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (131843571..131885436, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (132966483..133008351, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375763 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:132517092-132517279 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:132647081-132647686 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:132647687-132648291 Neighboring gene RNA binding motif protein 45 pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:132783439-132783966 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:132798484-132799683 Neighboring gene NANOG hESC enhancer GRCh37_chr8:132823618-132824138 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27990 Neighboring gene NANOG hESC enhancer GRCh37_chr8:132832316-132832817 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:132868859-132870058 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19556 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27991 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19557 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr8:132964728-132965406 Neighboring gene EFR3 homolog A Neighboring gene MED14-independent group 3 enhancer GRCh37_chr8:133036851-133038050 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:133057119-133057670 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:133066195-133066695 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:133070122-133070699 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:133070700-133071276 Neighboring gene otoconin 90

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    131843571..131885436 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001746093.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    132966483..133008351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079444.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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