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LOC107987105 uncharacterized LOC107987105 [ Homo sapiens (human) ]

Gene ID: 107987105, updated on 17-Sep-2024

Summary

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Gene symbol
LOC107987105
Gene description
uncharacterized LOC107987105
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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See LOC107987105 in Genome Data Viewer
Location:
9q31.1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (104530211..104747639, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (116704999..116922429, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ReSE screen-validated silencer GRCh37_chr9:107280917-107281135 Neighboring gene olfactory receptor family 13 subfamily F member 1 Neighboring gene olfactory receptor family 13 subfamily C member 4 Neighboring gene olfactory receptor family 13 subfamily C member 3 Neighboring gene olfactory receptor family 13 subfamily C member 8 Neighboring gene olfactory receptor family 13 subfamily D member 2 pseudogene Neighboring gene olfactory receptor family 13 subfamily C member 5 Neighboring gene olfactory receptor family 13 subfamily C member 2 Neighboring gene olfactory receptor family 13 subfamily C member 9 Neighboring gene olfactory receptor family 13 subfamily I member 1 pseudogene Neighboring gene olfactory receptor family 13 subfamily C member 1 pseudogene Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:107486341-107487540 Neighboring gene olfactory receptor family 13 subfamily D member 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20143 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28729 Neighboring gene olfactory receptor family 13 subfamily D member 3 pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr9:107526139-107526338 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20144 Neighboring gene nipsnap homolog 3A Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28730 Neighboring gene nipsnap homolog 3B Neighboring gene ATP binding cassette subfamily A member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    104530211..104747639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007061705.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    116704999..116922429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007079823.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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