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LOC107987346 uncharacterized LOC107987346 [ Homo sapiens (human) ]

Gene ID: 107987346, updated on 10-Oct-2023

Summary

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Gene symbol
LOC107987346
Gene description
uncharacterized LOC107987346
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

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Location:
Yq11.223
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) Y NC_000024.10 (21228137..21253374)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) Y NC_060948.1 (22103369..22128638)

Chromosome Y - NC_000024.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377225 Neighboring gene neurofilament light pseudogene 1 Neighboring gene uncharacterized LOC107987347 Neighboring gene RNA binding motif protein Y-linked family 2 member S, pseudogene Neighboring gene PRORY Y-linked lncRNA Neighboring gene RNA binding motif protein Y-linked family 2 member E, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000024.10 Reference GRCh38.p14 Primary Assembly

    Range
    21228137..21253374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_001756076.2 RNA Sequence

  2. XR_007068467.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060948.1 Alternate T2T-CHM13v2.0

    Range
    22103369..22128638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007093630.1 RNA Sequence

  2. XR_007093629.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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