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LOC108757784 uncharacterized LOC108757784 [ Trachymyrmex cornetzi ]

Gene ID: 108757784, updated on 1-Oct-2024

Summary

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Gene symbol
LOC108757784
Gene description
uncharacterized LOC108757784
Locus tag
ALC57_00281
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachymyrmex cornetzi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Trachymyrmex
Orthologs
honey bee all
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Genomic context

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See LOC108757784 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Tcor1.0 (GCF_001594075.1) Unplaced Scaffold NW_017295557.1 (47338..51570, complement)

NW_017295557.1Genomic Context describing neighboring genes Neighboring gene cryptochrome 2 Neighboring gene translocating chain-associated membrane protein 1 Neighboring gene RCC1 and BTB domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017295557.1 Unplaced Scaffold Reference Tcor1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC108757784

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachymyrmex cornetzi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tcor1.0

Genomic

  1. NW_017295557.1 Reference Tcor1.0

    Range
    47338..51570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018502354.1 → XP_018357856.1  uncharacterized protein LOC108757784

    UniProtKB/TrEMBL
    A0A151JSC3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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