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Cry2 cryptochrome 2 [ Trachymyrmex cornetzi ]

Gene ID: 108757856, updated on 10-Oct-2024

Summary

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Gene symbol
Cry2
Gene description
cryptochrome 2
Locus tag
ALC57_00280
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachymyrmex cornetzi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Trachymyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See Cry2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Tcor1.0 (GCF_001594075.1) Unplaced Scaffold NW_017295557.1 (15632..39480, complement)

NW_017295557.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108757784 Neighboring gene translocating chain-associated membrane protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017295557.1 Unplaced Scaffold Reference Tcor1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cryptochrome-1-like
Names
Cryptochrome-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachymyrmex cornetzi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tcor1.0

Genomic

  1. NW_017295557.1 Reference Tcor1.0

    Range
    15632..39480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018502518.1 → XP_018358020.1  cryptochrome-1-like

    UniProtKB/TrEMBL
    A0A151JSW6

  2. XM_018502528.1 → XP_018358030.1  cryptochrome-1-like

    UniProtKB/TrEMBL
    A0A151JSW6

  3. XM_018502537.1 → XP_018358039.1  cryptochrome-1-like

    UniProtKB/TrEMBL
    A0A151JSW6
Nucleotide Protein
Heading Accession and Version

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