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Tfb4 transcription factor B4 [ Trachymyrmex cornetzi ]

Gene ID: 108771147, updated on 10-Oct-2024

Summary

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Gene symbol
Tfb4
Gene description
transcription factor B4
Locus tag
ALC57_03018
Gene type
protein coding
RefSeq status
MODEL
Organism
Trachymyrmex cornetzi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Trachymyrmex
Orthologs
fruit fly honey bee all
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Genomic context

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See Tfb4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Tcor1.0 (GCF_001594075.1) Unplaced Scaffold NW_017295981.1 (536484..537895, complement)

NW_017295981.1Genomic Context describing neighboring genes Neighboring gene sideroflexin-1-like Neighboring gene anaphase-promoting complex subunit CDC26-like Neighboring gene inhibitor of growth family, member 3 Neighboring gene uncharacterized LOC108771129

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017295981.1 Unplaced Scaffold Reference Tcor1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trachymyrmex cornetzi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tcor1.0

Genomic

  1. NW_017295981.1 Reference Tcor1.0

    Range
    536484..537895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018523072.1 → XP_018378574.1  general transcription factor IIH subunit 3

    UniProtKB/TrEMBL
    A0A151JMR5
Nucleotide Protein
Heading Accession and Version

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