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U2A small nuclear ribonucleoprotein polypeptide A'-like U2A [ Bactrocera latifrons ]

Gene ID: 108978994, updated on 15-May-2024

Summary

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Gene symbol
U2A
Gene description
small nuclear ribonucleoprotein polypeptide A'-like U2A
See related
EnsemblRapid:LOC108978994
Gene type
protein coding
RefSeq status
MODEL
Organism
Bactrocera latifrons
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Bactrocera; Bactrocera
Also known as
U2A_0
Orthologs
fruit fly all
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Genomic context

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See U2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM185335v1 (GCF_001853355.1) Unplaced Scaffold NW_017534741.1 (571656..572720, complement)

NW_017534741.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C20orf24 homolog Neighboring gene F-actin-uncapping protein LRRC16A Neighboring gene mitochondrial ribosomal protein L52 Neighboring gene mus81 structure-specific endonuclease subunit Neighboring gene aquaporin-2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017534741.1 Unplaced Scaffold Reference ASM185335v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables U2 snRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable U2 small nuclear ribonucleoprotein A'
Names
putative U2 small nuclear ribonucleoprotein A'

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bactrocera latifrons Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM185335v1 Primary Assembly

Genomic

  1. NW_017534741.1 Reference ASM185335v1 Primary Assembly

    Range
    571656..572720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018949535.1 → XP_018805080.1  probable U2 small nuclear ribonucleoprotein A'

    UniProtKB/TrEMBL
    A0A0K8VNX4
    Related
    XP_018805080.1, XM_018949535.1
    Conserved Domains (2) summary
    sd00033
    Location:22 → 43
    LRR_RI; leucine-rich repeat [structural motif]
    pfam14580
    Location:1 → 175
    LRR_9; Leucine-rich repeat
Nucleotide Protein
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