U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ndr1 nodal-related 1 [ Cyprinus carpio (common carp) ]

Gene ID: 109046375, updated on 7-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
ndr1
Gene description
nodal-related 1
See related
Ensembl:ENSCCRG00000004305
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
Also known as
squint
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ndr1 in Genome Data Viewer
Location:
chromosome: A21
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A21 NC_056592.1 (10586196..10588808)
100 previous assembly common carp genome (GCF_000951615.1) 42 NC_031738.1 (10322712..10326413, complement)

Chromosome A21 - NC_056592.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109046293 Neighboring gene uncharacterized LOC122134788 Neighboring gene eukaryotic translation initiation factor 4E-binding protein 2-like Neighboring gene ankyrin-1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type I activin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
nodal homolog 2-A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056592.1 Reference ASM1834038v1 Primary Assembly

    Range
    10586196..10588808
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019064131.2 → XP_018919676.1  nodal homolog 2-A

    UniProtKB/TrEMBL
    A0A8C1A401, A0A9Q9UX94
    Related
    ENSCCRP00000007357.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases