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FAM53B family with sequence similarity 53 member B [ Bos indicus (zebu cattle) ]

Gene ID: 109579173, updated on 14-Mar-2024

Summary

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Gene symbol
FAM53B
Gene description
family with sequence similarity 53 member B
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See FAM53B in Genome Data Viewer
Location:
chromosome: 26
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Bos_indicus_1.0 (GCF_000247795.1) 26 NC_032675.1 (45193117..45269307, complement)

Chromosome 26 - NC_032675.1Genomic Context describing neighboring genes Neighboring gene phospholysine phosphohistidine inorganic pyrophosphate phosphatase Neighboring gene uncharacterized LOC109553145 Neighboring gene EEF1A lysine methyltransferase 2 Neighboring gene abraxas 2, BRISC complex subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_032675.1 Chromosome 26 Reference Bos_indicus_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM53B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bos_indicus_1.0 Primary Assembly

Genomic

  1. NC_032675.1 Reference Bos_indicus_1.0 Primary Assembly

    Range
    45193117..45269307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019988729.1 → XP_019844288.1  protein FAM53B isoform X1

    UniProtKB/TrEMBL
    A0A6P5E137
    Conserved Domains (1) summary
    pfam15242
    Location:1 → 304
    FAM53; Family of FAM53

  2. XM_019988730.1 → XP_019844289.1  protein FAM53B isoform X2

    UniProtKB/TrEMBL
    A0A6P5E1R4
    Conserved Domains (1) summary
    pfam15242
    Location:1 → 273
    FAM53; Family of FAM53
Nucleotide Protein
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