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tppp3 tubulin polymerization-promoting protein family member 3 [ Paralichthys olivaceus (Japanese flounder) ]

Gene ID: 109648301, updated on 5-Nov-2024

Summary

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Gene symbol
tppp3
Gene description
tubulin polymerization-promoting protein family member 3
See related
EnsemblRapid:ENSPOLG00010000250
Gene type
protein coding
RefSeq status
MODEL
Organism
Paralichthys olivaceus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Paralichthyidae; Paralichthys
Orthologs
human zebrafish all
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Genomic context

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See tppp3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_10 current ASM2471397v2 (GCF_024713975.1) 1 NC_091093.1 (30530599..30533109)
100 previous assembly Flounder_ref_guided_V1.0 (GCF_001970005.1) Unplaced Scaffold NW_017866494.1 (43..1826)

Chromosome 1 - NC_091093.1Genomic Context describing neighboring genes Neighboring gene hydroxysteroid (11-beta) dehydrogenase 2 Neighboring gene zinc finger DHHC-type containing 1 Neighboring gene transient receptor potential cation channel subfamily M member 1 Neighboring gene chymotrypsin B-like Neighboring gene galanin receptor 1b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule bundle formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polymerization-promoting protein family member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024713975.1-RS_2024_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2471397v2 Primary Assembly

Genomic

  1. NC_091093.1 Reference ASM2471397v2 Primary Assembly

    Range
    30530599..30533109
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_069527324.1 → XP_069383425.1  tubulin polymerization-promoting protein family member 3

    Related
    ENSPOLP00010000612.1, ENSPOLT00010000690.1

  2. XM_069527329.1 → XP_069383430.1  tubulin polymerization-promoting protein family member 3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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