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MTCYBP42 MT-CYB pseudogene 42 [ Homo sapiens (human) ]

Gene ID: 109729153, updated on 17-Sep-2024

Summary

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Official Symbol
MTCYBP42provided by HGNC
Official Full Name
MT-CYB pseudogene 42provided by HGNC
Primary source
HGNC:HGNC:52310
See related
Ensembl:ENSG00000228803 AllianceGenome:HGNC:52310
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See MTCYBP42 in Genome Data Viewer
Location:
7p15.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (22747675..22748804, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (22883579..22884708, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (22787294..22788423, complement)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC401312 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22703992-22704599 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22704600-22705208 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22705209-22705815 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22708433-22709061 Neighboring gene Sharpr-MPRA regulatory region 4516 Neighboring gene CRISPRi-validated cis-regulatory element chr7.1154 Neighboring gene CRISPRi-validated cis-regulatory element chr7.1155 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:22748460-22749096 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18003 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:22766269-22767468 Neighboring gene IL6 antisense RNA 1 Neighboring gene interleukin 6 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:22821663-22822163 Neighboring gene ribosomal protein S26 pseudogene 32 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:22839818-22840719 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:22841621-22842521 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:22850833-22851788 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:22861949-22862709 Neighboring gene translocase of outer mitochondrial membrane 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • mitochondrially encoded cytochrome b pseudogene 42

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_052933.1 

    Range
    101..1230
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    22747675..22748804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    22883579..22884708 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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