U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CVCV_gp3 polyprotein [ Grapevine vein clearing virus ]

Gene ID: 10973933, updated on 18-Aug-2023

Summary

Gene symbol
CVCV_gp3
Gene description
polyprotein
Locus tag
CVCV_gp3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Grapevine vein clearing virus (isolate: LBC0903, nat-host: grapevine (Chardonel))
Lineage
Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Sequence:
NC_015784.2 (1495..7320)

NC_015784.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_015784.2 Reference assembly

    Range
    1495..7320
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_004732983.2 polyprotein [Grapevine vein clearing virus]

    See identical proteins and their annotated locations for YP_004732983.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A411H8R5, F8TPA9
    Conserved Domains (4) summary
    cd01647
    Location:14511637
    RT_LTR; RT_LTR: Reverse transcriptases (RTs) from retrotransposons and retroviruses which have long terminal repeats (LTRs) in their DNA copies but not in their RNA template. RT catalyzes DNA replication from an RNA template, and is responsible for the ...
    pfam00078
    Location:14791637
    RVT_1; Reverse transcriptase (RNA-dependent DNA polymerase)
    pfam00098
    Location:905922
    zf-CCHC; Zinc knuckle
    cl14782
    Location:17331861
    RNase_H_like; Ribonuclease H-like superfamily, including RNase H, HI, HII, HIII, and RNase-like domain IV of spliceosomal protein Prp8