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LOC110091777 uncharacterized LOC110091777 [ Homo sapiens (human) ]

Gene ID: 110091777, updated on 17-Sep-2024

Summary

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Gene symbol
LOC110091777
Gene description
uncharacterized LOC110091777
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC110091777 in Genome Data Viewer
Location:
21p12
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (6858450..6901489)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (19239080..19243573)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) Unplaced Scaffold NT_167208.1 (1..26089, complement)

Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102724701 Neighboring gene carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2-like Neighboring gene CXADR, Ig-like cell adhesion molecule pseudogene Neighboring gene microRNA 8069-1 Neighboring gene fem-1 homolog A pseudogene Neighboring gene telomeric repeat-binding factor 1-like Neighboring gene ribosome biogenesis protein SLX9 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. Kimura K, et al. Genome Res, 2006 Jan. PMID 16344560, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_146655.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    FP475955

  2. NR_146656.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    FP475955

  3. NR_146657.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    DA100741, FP475955

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

    Range
    6858450..6901489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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