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LOC110254493 cytochrome c oxidase subunit 6B1 [ Exaiptasia diaphana ]

Gene ID: 110254493, updated on 23-Nov-2023

Summary

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Gene symbol
LOC110254493
Gene description
cytochrome c oxidase subunit 6B1
Locus tag
AC249_AIPGENE22962
See related
EnsemblRapid:LOC110254493
Gene type
protein coding
RefSeq status
MODEL
Organism
Exaiptasia diaphana
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Aiptasiidae; Exaiptasia
Also known as
COX6B1
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Genomic context

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See LOC110254493 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_11 current Aiptasia genome 1.1 (GCF_001417965.1) Unplaced Scaffold NW_018388410.1 (1749..4182)

NW_018388410.1Genomic Context describing neighboring genes Neighboring gene leukocyte receptor cluster member 8 homolog Neighboring gene uncharacterized LOC110254492 Neighboring gene putative ankyrin repeat protein RBE_0997 Neighboring gene uncharacterized LOC110254494

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018388410 Unplaced Scaffold Reference Aiptasia genome 1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Developing the anemone Aiptasia as a tractable model for cnidarian-dinoflagellate symbiosis: the transcriptome of aposymbiotic A. pallida. Lehnert EM, et al. BMC Genomics, 2012 Jun 22. PMID 22726260, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of respiratory chain complex IV IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytochrome c oxidase subunit 6B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001417965.1-RS_2023_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Aiptasia genome 1.1

Genomic

  1. NW_018388410.1 Reference Aiptasia genome 1.1

    Range
    1749..4182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021061500.2 → XP_020917159.1  cytochrome c oxidase subunit 6B1

    UniProtKB/TrEMBL
    A0A913Y9A2
    Related
    XP_020917159.1, XM_021061500.2
    Conserved Domains (1) summary
    cd00926
    Location:8 → 79
    Cyt_c_Oxidase_VIb; Cytochrome c oxidase subunit VIb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...
Nucleotide Protein
Heading Accession and Version

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