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LOC110408742 histone H2A-IV-like [ Numida meleagris (helmeted guineafowl) ]

Gene ID: 110408742, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110408742
Gene description
histone H2A-IV-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Numida meleagris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Numididae; Numida
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Genomic context

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See LOC110408742 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current NumMel1.0 (GCF_002078875.1) 1 NC_034409.1 (48740846..48817585)

Chromosome 1 - NC_034409.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110408171 Neighboring gene single-pass membrane protein with coiled-coil domains 3 Neighboring gene histone H1 Neighboring gene WW domain binding protein 11 Neighboring gene histone H2B 1/2/3/4/6 Neighboring gene histone H4 Neighboring gene uncharacterized LOC110387684 Neighboring gene histone H4 Neighboring gene histone H2A.J-like Neighboring gene histone H2B 1/2/3/4/6 Neighboring gene histone H1.10 Neighboring gene histone H4 Neighboring gene histone H3 Neighboring gene histone H4 Neighboring gene uncharacterized LOC110387705 Neighboring gene histone H1.03 Neighboring gene histone H2A-IV Neighboring gene histone H1.01 Neighboring gene histone H2B 8 Neighboring gene histone H2B 1/2/3/4/6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034409.1 Chromosome 1 Reference NumMel1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A-IV-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Numida meleagris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NumMel1.0 Primary Assembly

Genomic

  1. NC_034409.1 Reference NumMel1.0 Primary Assembly

    Range
    48740846..48817585
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021374606.1 → XP_021230281.1  histone H2A-IV-like

    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 129
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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