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LOC110437693 phosphoribosylamine--glycine ligase-like [ Sorghum bicolor (sorghum) ]

Gene ID: 110437693, updated on 22-Oct-2023

Summary

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Gene symbol
LOC110437693
Gene description
phosphoribosylamine--glycine ligase-like
Locus tag
SORBI_3008G070350
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC110437693 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 8 NC_012877.2 (9182009..9185878, complement)

Chromosome 8 - NC_012877.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110437501 Neighboring gene uncharacterized LOC110429652 Neighboring gene translocase of chloroplast 90, chloroplastic Neighboring gene protein SUPPRESSOR OF GENE SILENCING 3 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012877.2 Chromosome 8 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoribosylamine-glycine ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoribosylamine--glycine ligase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012877.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    9182009..9185878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021466274.1 → XP_021321949.1  phosphoribosylamine--glycine ligase-like isoform X1

    UniProtKB/TrEMBL
    A0A1Z5R621, A0A921U6W0
    Conserved Domains (1) summary
    PLN02257
    Location:94 → 526
    PLN02257; phosphoribosylamine--glycine ligase

  2. XM_021466275.1 → XP_021321950.1  phosphoribosylamine--glycine ligase-like isoform X2

    UniProtKB/TrEMBL
    A0A1Z5R553, A0A921U7I0
    Conserved Domains (1) summary
    PLN02257
    Location:93 → 525
    PLN02257; phosphoribosylamine--glycine ligase

  3. XM_021466272.1 → XP_021321947.1  phosphoribosylamine--glycine ligase-like isoform X1

    UniProtKB/TrEMBL
    A0A1Z5R621, A0A921U6W0
    Conserved Domains (1) summary
    PLN02257
    Location:94 → 526
    PLN02257; phosphoribosylamine--glycine ligase

  4. XM_021466273.1 → XP_021321948.1  phosphoribosylamine--glycine ligase-like isoform X1

    UniProtKB/TrEMBL
    A0A1Z5R621, A0A921U6W0
    Conserved Domains (1) summary
    PLN02257
    Location:94 → 526
    PLN02257; phosphoribosylamine--glycine ligase
Nucleotide Protein
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