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LOC110785398 cysteine synthase, chloroplastic/chromoplastic [ Spinacia oleracea (spinach) ]

Gene ID: 110785398, updated on 10-Oct-2024

Summary

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Gene symbol
LOC110785398
Gene description
cysteine synthase, chloroplastic/chromoplastic
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Spinacia oleracea
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia
Also known as
CS-B; cysK
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Genomic context

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See LOC110785398 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_06 current BTI_SOV_V1 (GCF_020520425.1) 3 NC_079489.1 (18649683..18659235)
100 previous assembly ASM200726v1 (GCF_002007265.1) Unplaced Scaffold NW_018931468.1 (105690..114715, complement)

Chromosome 3 - NC_079489.1Genomic Context describing neighboring genes Neighboring gene early nodule-specific protein 2-like Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene (+)-neomenthol dehydrogenase Neighboring gene uncharacterized LOC110785397

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. O-acetylserine(thiol)lyase from spinach (Spinacia oleracea L.) leaf: cDNA cloning, characterization, and overexpression in Escherichia coli of the chloroplast isoform. Rolland N, et al. Arch Biochem Biophys, 1993 Jan. PMID 8424655
  2. cDNA cloning and expression of cysteine synthase B localized in chloroplasts of Spinacia oleracea. Saito K, et al. FEBS Lett, 1993 Jun 21. PMID 8405359
  3. An O-acetylserine (thiol) lyase cDNA from spinach. Hell R, et al. Plant Physiol, 1993 Jul. PMID 8278530, Free PMC Article
  4. Common sequence motifs coding for higher-plant and prokaryotic O-acetylserine (thiol)-lyases: bacterial origin of a chloroplast transit peptide? Rolland N, et al. Biochem J, 1993 Aug 1. PMID 7916619, Free PMC Article
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double fertilization forming a zygote and endosperm IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pollen tube growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine synthase, chloroplastic/chromoplastic
Names
CSase B
O-acetylserine sulfhydrylase
O-acetylserine-(thiol)-lyase
OAS-TL B
chloroplast cysteine synthase
NP_001392271.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001405342.1 → NP_001392271.1  cysteine synthase, chloroplastic/chromoplastic

    Status: VALIDATED

    Source sequence(s)
    D14722
    UniProtKB/TrEMBL
    A0A9R0IA61

RefSeqs of Annotated Genomes: GCF_020520425.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BTI_SOV_V1 Primary Assembly

Genomic

  1. NC_079489.1 Reference BTI_SOV_V1 Primary Assembly

    Range
    18649683..18659235
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P32260.2 GenPept UniProtKB/Swiss-Prot:P32260

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