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ETDC embryonic testis differentiation homolog C [ Homo sapiens (human) ]

Gene ID: 110806299, updated on 17-Sep-2024

Summary

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Official Symbol
ETDCprovided by HGNC
Official Full Name
embryonic testis differentiation homolog Cprovided by HGNC
Primary source
HGNC:HGNC:53450
See related
Ensembl:ENSG00000283644 AllianceGenome:HGNC:53450
Gene type
protein coding
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
all
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Genomic context

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See ETDC in Genome Data Viewer
Location:
Xq26.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (135309480..135309659)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (133635289..133635468)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (134443406..134443585)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene zinc finger protein 75D Neighboring gene embryonic testis differentiation homolog A Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:134407073-134407615 Neighboring gene tigger transposable element derived 7 pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:134436208-134436836 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:134436837-134437464 Neighboring gene uncharacterized LOC105373342 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:134471438-134471938 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:134471939-134472439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29980 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 21019 Neighboring gene zinc finger protein 449

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

General gene information

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Homology

General protein information

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Preferred Names
embryonic testis differentiation protein homolog C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001358449.1 → NP_001345378.1  embryonic testis differentiation protein homolog C

    Status: INFERRED

    Source sequence(s)
    AL590282
    Consensus CDS
    CCDS87783.1
    UniProtKB/Swiss-Prot
    A0A1B0GVM5
    Related
    ENSP00000490576.1, ENST00000635820.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    135309480..135309659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    133635289..133635468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A0A1B0GVM5.1 GenPept UniProtKB/Swiss-Prot:A0A1B0GVM5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials