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LOC110973766 cytoplasmic phosphatidylinositol transfer protein 1-like [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110973766, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110973766
Gene description
cytoplasmic phosphatidylinositol transfer protein 1-like
See related
EnsemblRapid:LOC110973766
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110973766 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091365.1 (1695832..1734821, complement)

NW_019091365.1Genomic Context describing neighboring genes Neighboring gene actin-related protein 2/3 complex subunit 1A-like Neighboring gene histone H2A-like Neighboring gene histone H3-like centromeric protein CSE4 Neighboring gene autophagy protein 12-like Neighboring gene cilia- and flagella-associated protein 52-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091365 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic phosphatidylinositol transfer protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091365.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    1695832..1734821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022224851.1 → XP_022080543.1  cytoplasmic phosphatidylinositol transfer protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A8B7XIC0
    Related
    XP_022080543.1, XM_022224851.1
    Conserved Domains (1) summary
    cl14643
    Location:2 → 254
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily

  2. XM_022224852.1 → XP_022080544.1  cytoplasmic phosphatidylinositol transfer protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A8B7XIC2
    Related
    XP_022080544.1, XM_022224852.1
    Conserved Domains (1) summary
    cl14643
    Location:1 → 231
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
Nucleotide Protein
Heading Accession and Version

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