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LOC111591708 uncharacterized LOC111591708 [ Ceratitis capitata (Mediterranean fruit fly) ]

Gene ID: 111591708, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111591708
Gene description
uncharacterized LOC111591708
See related
EnsemblRapid:LOC111591708
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratitis capitata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Tephritoidea; Tephritidae; Ceratitis; Ceratitis
Also known as
MEX3B
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Genomic context

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See LOC111591708 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Ccap_2.1 (GCF_000347755.3) Unplaced Scaffold NW_019376577.1 (95164..106929, complement)

NW_019376577.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019376577 Unplaced Scaffold Reference Ccap_2.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A genomic perspective to assessing quality of mass-reared SIT flies used in Mediterranean fruit fly (Ceratitis capitata) eradication in California. Calla B, et al. BMC Genomics, 2014 Feb 5. PMID 24495485, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC111591708
Names
RNA-binding protein MEX3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratitis capitata Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ccap_2.1 Primary Assembly

Genomic

  1. NW_019376577.1 Reference Ccap_2.1 Primary Assembly

    Range
    95164..106929 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023303263.1 → XP_023159031.1  uncharacterized protein LOC111591708

    UniProtKB/TrEMBL
    A0A811UWU1
    Related
    XP_023159031.1, XM_023303263.1
    Conserved Domains (3) summary
    smart00322
    Location:104 → 169
    KH; K homology RNA-binding domain
    cd00105
    Location:11 → 56
    KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...
    cd16518
    Location:548 → 588
    RING-HC_MEX3; RING finger, HC subclass, found in RNA-binding proteins of the evolutionarily-conserved MEX-3 family
Nucleotide Protein
Heading Accession and Version

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