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LOC111818946 40S ribosomal protein S13-like [ Octodon degus (degu) ]

Gene ID: 111818946, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111818946
Gene description
40S ribosomal protein S13-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
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Genomic context

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See LOC111818946 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524684.1 (1618431..1618820, complement)

NW_004524684.1Genomic Context describing neighboring genes Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene protein tyrosine phosphatase non-receptor type 12 Neighboring gene round spermatid basic protein 1 like Neighboring gene small nucleolar RNA U13 Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524684 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small ribosomal subunit rRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S13-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524684.1 Reference OctDeg1.0 Primary Assembly

    Range
    1618431..1618820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023724313.1 → XP_023580081.1  40S ribosomal protein S13-like

    UniProtKB/TrEMBL
    A0A6P6F6T3
    Conserved Domains (1) summary
    cl26807
    Location:3 → 95
    Ribosomal_S13_N; Ribosomal S13/S15 N-terminal domain
Nucleotide Protein
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