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LOC112268198 uncharacterized LOC112268198 [ Homo sapiens (human) ]

Gene ID: 112268198, updated on 15-Mar-2024

Summary

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Gene symbol
LOC112268198
Gene description
uncharacterized LOC112268198
See related
Ensembl:ENSG00000279801
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
all
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Genomic context

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See LOC112268198 in Genome Data Viewer
Location:
17q25.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (77444917..77447165)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (78338717..78344446)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene septin 9 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75394009-75394727 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12831 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9035 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75405296-75405800 Neighboring gene microRNA 4316 Neighboring gene uncharacterized LOC112268199 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75415683-75416350 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75418355-75419020 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75419156-75419960 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12832 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75422645-75423553 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12833 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12834 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75430535-75431348 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12835 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75433791-75434604 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12836 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12837 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12838 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12839 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12840 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75443411-75443911 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75445010-75445917 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75445918-75446824 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75446825-75447732 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12841 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75448639-75449546 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12842 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75450454-75451360 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75451361-75452267 Neighboring gene uncharacterized LOC105371903 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75452917-75453530 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75453531-75454145 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75455989-75456602 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75456603-75457216 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12844 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12845 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12846 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 12847 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75462088-75462839 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75462840-75463592 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75464738-75465290 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr17:75466846-75468045 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75468633-75469338 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75470024-75470524 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75470525-75471025 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75471103-75471943 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75492509-75493058 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr17:75493059-75493606 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75498470-75498970 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75523708-75524208 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75524209-75524709 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75531141-75531642 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:75531643-75532142 Neighboring gene uncharacterized LOC400622

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Hereditary Neuralgic Amyotrophy – RETIRED CHAPTER, FOR HISTORICAL REFERENCE ONLY. Adam MP, et al. , 1993. PMID 20301569
  2. Translational control of SEPT9 isoforms is perturbed in disease. McDade SS, et al. Hum Mol Genet, 2007 Apr 1. PMID 17468182
  3. Altered expression of the septin gene, SEPT9, in ovarian neoplasia. Burrows JF, et al. J Pathol, 2003 Dec. PMID 14648661
  4. Genomic organization, complex splicing pattern and expression of a human septin gene on chromosome 17q25.3. McIlhatton MA, et al. Oncogene, 2001 Sep 13. PMID 11593400
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

General gene information

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Homology

Clone Names

  • FLJ40589

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    77444917..77447165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004837547.2 RNA Sequence

    Related
    ENST00000624282.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    78338717..78344446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007087742.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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