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LOC112268225 uncharacterized LOC112268225 [ Homo sapiens (human) ]

Gene ID: 112268225, updated on 17-Sep-2024

Summary

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Gene symbol
LOC112268225
Gene description
uncharacterized LOC112268225
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268225 in Genome Data Viewer
Location:
1p34.2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (43368212..43379199)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (43238729..43255087)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43824440-43824948 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 781 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43832389-43833123 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:43833124-43833858 Neighboring gene cell division cycle 20 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 917 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:43834951-43835136 Neighboring gene microRNA 6734 Neighboring gene ELOVL fatty acid elongase 1 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:43838300-43839499 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:43844005-43844173 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 918 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 783 Neighboring gene MED8 antisense RNA 1 Neighboring gene mediator complex subunit 8 Neighboring gene SZT2 subunit of KICSTOR complex Neighboring gene SZT2 antisense RNA 1 Neighboring gene microRNA 6735

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    43368212..43379199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007066048.1 RNA Sequence

  2. XR_007066049.1 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    43238729..43255087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007070135.1 RNA Sequence

  2. XR_007070136.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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