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LOC112268307 uncharacterized LOC112268307 [ Homo sapiens (human) ]

Gene ID: 112268307, updated on 10-Oct-2023

Summary

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Gene symbol
LOC112268307
Gene description
uncharacterized LOC112268307
Gene type
protein coding
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xq11.2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (64205946..64312562)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (62631221..62737840)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene zinc finger protein 670 pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chrX:63372768-63373287 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20877 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20878 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29708 Neighboring gene APC membrane recruitment protein 1 Neighboring gene RNA, 7SL, cytoplasmic 799, pseudogene Neighboring gene ankyrin repeat and SOCS box containing 12 Neighboring gene myotubularin related protein 8 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:63521683-63522184 Neighboring gene KPNA4 pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29709 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29710 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29711 Neighboring gene profilin 5, pseudogene Neighboring gene SHC adaptor protein 1 pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

General protein information

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Preferred Names
uncharacterized protein LOC112268307

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    64205946..64312562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047442705.1 → XP_047298661.1  uncharacterized protein LOC112268307 isoform X1

  2. XM_047442706.1 → XP_047298662.1  uncharacterized protein LOC112268307 isoform X2

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    62631221..62737840
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047447115.1 → XP_047303071.1  uncharacterized protein LOC112268307 isoform X1

  2. XM_047447116.1 → XP_047303072.1  uncharacterized protein LOC112268307 isoform X2

Nucleotide Protein
Heading Accession and Version

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