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LOC112268469 uncharacterized LOC112268469 [ Homo sapiens (human) ]

Gene ID: 112268469, updated on 17-Sep-2024

Summary

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Gene symbol
LOC112268469
Gene description
uncharacterized LOC112268469
Gene type
ncRNA
RefSeq status
MODEL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC112268469 in Genome Data Viewer
Location:
4q27
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (122075403..122078317, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (125379462..125382380, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene BBS7 divergent transcript Neighboring gene transient receptor potential cation channel subfamily C member 3 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15661 Neighboring gene uncharacterized LOC102724158 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15662 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21873 Neighboring gene Sharpr-MPRA regulatory region 11420 Neighboring gene RNA, 7SL, cytoplasmic 335, pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:123072777-123073578 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15664 Neighboring gene bridge-like lipid transfer protein family member 1 Neighboring gene NANOG hESC enhancer GRCh37_chr4:123226936-123227466

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    122075403..122078317 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002959800.2 RNA Sequence

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    125379462..125382380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_007074949.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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