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LOC112269482 uncharacterized LOC112269482 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 112269482, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112269482
Gene description
uncharacterized LOC112269482
Locus tag
BRADI_5g06591v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC112269482 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 5 NC_016135.3 (8684936..8685950)

Chromosome 5 - NC_016135.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100832614 Neighboring gene uncharacterized LOC104585301 Neighboring gene protein FAR1-RELATED SEQUENCE 5-like Neighboring gene uncharacterized LOC112269489

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016135.3 Chromosome 5 Reference Brachypodium_distachyon_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC112269482

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016135.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    8684936..8685950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024456275.1 → XP_024312043.1  uncharacterized protein LOC112269482 isoform X1

    UniProtKB/TrEMBL
    A0A2K2CFN3, A0A2K2CFP4
    Conserved Domains (1) summary
    cd10017
    Location:34 → 106
    B3_DNA; Plant-specific B3-DNA binding domain

  2. XM_024456276.1 → XP_024312044.1  uncharacterized protein LOC112269482 isoform X2

    UniProtKB/TrEMBL
    A0A2K2CFP4
    Conserved Domains (1) summary
    cl15242
    Location:34 → 106
    BfiI_C_EcoRII_N_B3; DNA binding domains of BfiI, EcoRII and plant B3 proteins
Nucleotide Protein Strain
Heading Accession and Version

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