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LOC112269526 protein phosphatase 1 regulatory subunit INH3 [ Brachypodium distachyon (stiff brome) ]

Gene ID: 112269526, updated on 18-Sep-2024

Summary

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Gene symbol
LOC112269526
Gene description
protein phosphatase 1 regulatory subunit INH3
Locus tag
BRADI_5g00720v3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brachypodium distachyon
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Stipodae; Brachypodieae; Brachypodium
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Genomic context

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See LOC112269526 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
103 current Brachypodium_distachyon_v3.0 (GCF_000005505.3) 5 NC_016135.3 (669359..674857)

Chromosome 5 - NC_016135.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112269327 Neighboring gene uncharacterized LOC100828752 Neighboring gene putative FBD-associated F-box protein At5g56700 Neighboring gene RNA polymerase II C-terminal domain phosphatase-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016135.3 Chromosome 5 Reference Brachypodium_distachyon_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit INH3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brachypodium distachyon Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Brachypodium_distachyon_v3.0 Primary Assembly

Genomic

  1. NC_016135.3 Reference Brachypodium_distachyon_v3.0 Primary Assembly

    Range
    669359..674857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024456400.1 → XP_024312168.1  protein phosphatase 1 regulatory subunit INH3

    UniProtKB/TrEMBL
    I1IVH5
    Conserved Domains (1) summary
    pfam07491
    Location:43 → 82
    PPI_Ypi1; Protein phosphatase inhibitor
Nucleotide Protein Strain
Heading Accession and Version

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