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RAB43 RAB43, member RAS oncogene family [ Bos taurus (domestic cattle) ]

Gene ID: 112443508, updated on 4-Oct-2024

Summary

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Gene symbol
RAB43
Gene description
RAB43, member RAS oncogene family
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See RAB43 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (59022212..59041820, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene EF-hand and coiled-coil domain containing 1 Neighboring gene glycoprotein IX platelet Neighboring gene ISY1 splicing factor homolog Neighboring gene uncharacterized LOC112443509 Neighboring gene CCHC-type zinc finger nucleic acid binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking involved in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-43

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    59022212..59041820 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024983330.2 → XP_024839098.1  ras-related protein Rab-43 isoform X2

    Conserved Domains (1) summary
    cd01864
    Location:14 → 176
    Rab19; Rab GTPase family 19 (Rab19)

  2. XM_024983329.2 → XP_024839097.1  ras-related protein Rab-43 isoform X1

    Conserved Domains (1) summary
    cd01864
    Location:14 → 178
    Rab19; Rab GTPase family 19 (Rab19)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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