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LIN28B lin-28 homolog B [ Bos taurus (domestic cattle) ]

Gene ID: 112448101, updated on 10-Oct-2024

Summary

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Official Symbol
LIN28Bprovided by VGNC
Official Full Name
lin-28 homolog Bprovided by VGNC
Primary source
VGNC:VGNC:108131
See related
Ensembl:ENSBTAG00000043973
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See LIN28B in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (44943951..45086236, complement)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene HIG1 domain family member 1A, mitochondrial-like Neighboring gene popeye domain containing 3 Neighboring gene uncharacterized LOC112448050 Neighboring gene blood vessel epicardial substance Neighboring gene eukaryotic translation initiation factor 4E-like Neighboring gene HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Placental exosome-mediated Bta-miR-499-Lin28B/let-7 axis regulates inflammatory bias during early pregnancy. Zhao G, et al. Cell Death Dis, 2018 Jun 13. PMID 29899331, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. placental exosome-derived bta-miR-499 inhibits the activation of NF-kappaB via the Lin28B/let-7 axis.
    Title: Placental exosome-mediated Bta-miR-499-Lin28B/let-7 axis regulates inflammatory bias during early pregnancy.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lin-28 homolog B; protein lin-28 homolog B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    44943951..45086236 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059889868.1 → XP_059745851.1  protein lin-28 homolog B isoform X1

    Related
    ENSBTAP00000075334.1, ENSBTAT00000096065.1

  2. XM_059889869.1 → XP_059745852.1  protein lin-28 homolog B isoform X1

  3. XM_059889871.1 → XP_059745854.1  protein lin-28 homolog B isoform X2

    UniProtKB/TrEMBL
    A0AAA9SMN7

  4. XM_059889870.1 → XP_059745853.1  protein lin-28 homolog B isoform X2

    UniProtKB/TrEMBL
    A0AAA9SMN7
    Related
    ENSBTAP00000084030.1, ENSBTAT00000092997.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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