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LOC112552132 E3 ubiquitin-protein ligase TRIM7-like [ Alligator sinensis (Chinese alligator) ]

Gene ID: 112552132, updated on 2-Sep-2022

Summary

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Gene symbol
LOC112552132
Gene description
E3 ubiquitin-protein ligase TRIM7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator sinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
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Genomic context

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See LOC112552132 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM45574v1 (GCF_000455745.1) Unplaced Scaffold NW_005842782.1 (278409..296826, complement)

NW_005842782.1Genomic Context describing neighboring genes Neighboring gene ribonuclease P/MRP subunit p21 Neighboring gene zinc finger protein RFP-like Neighboring gene G protein nucleolar 1 (putative) Neighboring gene ATP binding cassette subfamily F member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005842782 Unplaced Scaffold Reference ASM45574v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
E3 ubiquitin-protein ligase TRIM7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Alligator sinensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM45574v1 Primary Assembly

Genomic

  1. NW_005842782.1 Reference ASM45574v1 Primary Assembly

    Range
    278409..296826 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025217003.1 → XP_025072788.1  E3 ubiquitin-protein ligase TRIM7-like

    UniProtKB/TrEMBL
    A0A3Q0HQI2
    Conserved Domains (2) summary
    cl17238
    Location:13 → 55
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl25407
    Location:105 → 200
    ClassIIa_HDAC_Gln-rich-N; Glutamine-rich N-terminal helical domain of various Class IIa histone deacetylases (HDAC4, HDAC5 and HDCA9)
Nucleotide Protein
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