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ifng1 Interferon gamma 1 [ Carassius auratus (goldfish) ]

Gene ID: 113048607, updated on 9-Nov-2023

Summary

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Gene symbol
ifng1
Gene description
Interferon gamma 1
See related
Ensembl:ENSCARG00000069254
Gene type
protein coding
RefSeq status
MODEL
Organism
Carassius auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Carassius
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Genomic context

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Location:
chromosome: 29
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM336829v1 (GCF_003368295.1) 29 NC_039271.1 (9201451..9203222, complement)

Chromosome 29 - NC_039271.1Genomic Context describing neighboring genes Neighboring gene dual specificity tyrosine-phosphorylation-regulated kinase 2-like Neighboring gene uncharacterized LOC113048606 Neighboring gene nuclear protein MDM1-like Neighboring gene calumenin-A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039271.1 Chromosome 29 Reference ASM336829v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular characterization, expression and functional analysis of goldfish (Carassius aurutus L.) interferon gamma. Grayfer L, et al. Dev Comp Immunol, 2009 Feb. PMID 18831986
  2. Antiviral protection mechanisms mediated by ginbuna crucian carp interferon gamma isoforms 1 and 2 through two distinct interferon gamma-receptors. Yabu T, et al. J Biochem, 2011 Dec. PMID 21903635

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables type II interferon receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC113048607
Names
IFNgamma1-1
Interferon gamma 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carassius auratus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM336829v1 Primary Assembly

Genomic

  1. NC_039271.1 Reference ASM336829v1 Primary Assembly

    Range
    9201451..9203222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026210476.1 → XP_026066261.1  uncharacterized protein LOC113048607

    UniProtKB/TrEMBL
    A0A6P6K2C0
    Related
    ENSCARP00000132984.1, ENSCART00000149590.1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B5B3U4.1 GenPept UniProtKB/Swiss-Prot:B5B3U4

Gene LinkOut

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Molecular Biology Databases