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LOC113240680 uncharacterized LOC113240680 [ Hyposmocoma kahamanoa ]

Gene ID: 113240680, updated on 23-Oct-2023

Summary

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Gene symbol
LOC113240680
Gene description
uncharacterized LOC113240680
Gene type
protein coding
RefSeq status
MODEL
Organism
Hyposmocoma kahamanoa
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Gelechioidea; Cosmopterigidae; Cosmopteriginae; Hyposmocoma
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Genomic context

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See LOC113240680 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM358959v1 (GCF_003589595.1) Unplaced Scaffold NW_020653575.1 (6537582..6539044)

NW_020653575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113225469 Neighboring gene uncharacterized LOC113240677 Neighboring gene uncharacterized LOC113240678 Neighboring gene hsp70-binding protein 1 Neighboring gene protein ALP1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020653575 Unplaced Scaffold Reference ASM358959v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC113240680

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hyposmocoma kahamanoa Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM358959v1

Genomic

  1. NW_020653575.1 Reference ASM358959v1

    Range
    6537582..6539044
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026478049.1 → XP_026333834.1  uncharacterized protein LOC113240680

    Conserved Domains (2) summary
    pfam02944
    Location:184 → 217
    BESS; BESS motif
    pfam10545
    Location:11 → 101
    MADF_DNA_bdg; Alcohol dehydrogenase transcription factor Myb/SANT-like
Nucleotide Protein
Heading Accession and Version

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