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LOC113502727 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like [ Trichoplusia ni (cabbage looper) ]

Gene ID: 113502727, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113502727
Gene description
isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like
See related
EnsemblRapid:ENSNTCG00000006518
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichoplusia ni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
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Genomic context

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See LOC113502727 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current tn1 (GCF_003590095.1) 17 NC_039494.1 (9245480..9257735)

Chromosome 17 - NC_039494.1Genomic Context describing neighboring genes Neighboring gene coatomer subunit gamma-like Neighboring gene transcriptional repressor protein YY1-like Neighboring gene CUE domain-containing protein 2 Neighboring gene 43 kDa receptor-associated protein of the synapse homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039494.1 Chromosome 17 Reference tn1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome responses of the host Trichoplusia ni to infection by the baculovirus Autographa californica multiple nucleopolyhedrovirus. Chen YR, et al. J Virol, 2014 Dec. PMID 25231311, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in isocitrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference tn1

Genomic

  1. NC_039494.1 Reference tn1

    Range
    9245480..9257735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026884384.1 → XP_026740185.1  isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial-like

    UniProtKB/TrEMBL
    A0A7E5WHI0
    Related
    ENSNTCP00000008190.1, ENSNTCT00000010271.1
    Conserved Domains (1) summary
    cl00445
    Location:54 → 385
    Iso_dh; Isocitrate/isopropylmalate dehydrogenase
Nucleotide Protein
Heading Accession and Version

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