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ND-49 NADH dehydrogenase (ubiquinone) 49 kDa subunit [ Trichoplusia ni (cabbage looper) ]

Gene ID: 113502730, updated on 26-Jun-2024

Summary

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Gene symbol
ND-49
Gene description
NADH dehydrogenase (ubiquinone) 49 kDa subunit
See related
EnsemblRapid:ENSNTCG00000004845
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichoplusia ni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
Orthologs
fruit fly all
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Genomic context

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See ND-49 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
100 current tn1 (GCF_003590095.1) 17 NC_039494.1 (8100860..8108564, complement)

Chromosome 17 - NC_039494.1Genomic Context describing neighboring genes Neighboring gene Family with sequence similarity 21 Neighboring gene Ribosomal RNA processing protein 1 homolog Nnp-1 Neighboring gene cleavage stimulation factor subunit su(f) Neighboring gene U6 snRNA-associated Sm-like protein LSm2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039494.1 Chromosome 17 Reference tn1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADH dehydrogenase (ubiquinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, NADH to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NADH-ubiquinone oxidoreductase 49 kDa subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference tn1

Genomic

  1. NC_039494.1 Reference tn1

    Range
    8100860..8108564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026884390.1 → XP_026740191.1  NADH-ubiquinone oxidoreductase 49 kDa subunit

    UniProtKB/TrEMBL
    A0A7E5WJ80
    Related
    ENSNTCP00000006200.1, ENSNTCT00000007635.1
    Conserved Domains (1) summary
    PRK06075
    Location:77 → 466
    PRK06075; NADH dehydrogenase subunit D; Validated
Nucleotide Protein
Heading Accession and Version

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