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Brd8 Bromodomain containing 8 [ Trichoplusia ni (cabbage looper) ]

Gene ID: 113509047, updated on 23-May-2024

Summary

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Gene symbol
Brd8
Gene description
Bromodomain containing 8
See related
EnsemblRapid:ENSNTCG00000008973
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichoplusia ni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
Orthologs
fruit fly all
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Genomic context

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See Brd8 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
100 current tn1 (GCF_003590095.1) 3 NC_039480.1 (5717617..5733968)

Chromosome 3 - NC_039480.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 431-like Neighboring gene phosphatidylserine decarboxylase proenzyme, mitochondrial Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene uncharacterized LOC113508679

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039480.1 Chromosome 3 Reference tn1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome responses of the host Trichoplusia ni to infection by the baculovirus Autographa californica multiple nucleopolyhedrovirus. Chen YR, et al. J Virol, 2014 Dec. PMID 25231311, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of NuA4 histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bromodomain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference tn1

Genomic

  1. NC_039480.1 Reference tn1

    Range
    5717617..5733968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026892314.1 → XP_026748115.1  bromodomain-containing protein 8 isoform X1

    UniProtKB/TrEMBL
    A0A7E5X4G7
    Conserved Domains (3) summary
    cd05507
    Location:679 → 782
    Bromo_brd8_like; Bromodomain, brd8_like subgroup. In mammals, brd8 (bromodomain containing 8) interacts with the thyroid hormone receptor in a ligand-dependent fashion and enhances thyroid hormone-dependent activation from thyroid response elements. Brd8 is thought to be ...
    pfam12287
    Location:206 → 377
    Caprin-1_C; Cytoplasmic activation/proliferation-associated protein-1 C term
    cl28246
    Location:323 → 615
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_026892315.1 → XP_026748116.1  bromodomain-containing protein 8 isoform X2

    UniProtKB/TrEMBL
    A0A7E5X610
    Related
    ENSNTCP00000011359.1, ENSNTCT00000014180.1
Nucleotide Protein
Heading Accession and Version

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