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LOC113687159 adhesive plaque matrix protein 2-like [ Pocillopora damicornis ]

Gene ID: 113687159, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113687159
Gene description
adhesive plaque matrix protein 2-like
See related
EnsemblRapid:LOC113687159
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See LOC113687159 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020843935.1 (125750..135653, complement)

NW_020843935.1Genomic Context describing neighboring genes Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene uncharacterized LOC113687162 Neighboring gene uncharacterized LOC113687163 Neighboring gene uncharacterized LOC113687160

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020843935 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adhesive plaque matrix protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020843935.1 Reference ASM370409v1 Primary Assembly

    Range
    125750..135653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027204867.1 → XP_027060668.1  adhesive plaque matrix protein 2-like

    Related
    XP_027060668.1, XM_027204867.1
Nucleotide Protein
Heading Accession and Version

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