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Vmn1r13 vomeronasal 1 receptor 13 [ Mus musculus (house mouse) ]

Gene ID: 113862, updated on 2-Nov-2024

Summary

Official Symbol
Vmn1r13provided by MGI
Official Full Name
vomeronasal 1 receptor 13provided by MGI
Primary source
MGI:MGI:2148526
See related
Ensembl:ENSMUSG00000064259 AllianceGenome:MGI:2148526
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
V1rc5
Summary
Predicted to enable signaling receptor activity. Acts upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See Vmn1r13 in Genome Data Viewer
Location:
6 B3; 6 27.82 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (57186843..57187745)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (57209858..57210760)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 12 Neighboring gene STARR-seq mESC enhancer starr_15998 Neighboring gene vomeronasal 1 receptor, pseudogene 8 Neighboring gene vomeronasal 1 receptor 14 Neighboring gene vomeronasal 1 receptor 15

Genomic regions, transcripts, and products

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Pathways from PubChem

General protein information

Preferred Names
vomeronasal 1 receptor, C5
Names
vomernasal 1 receptor Vmn1r13
vomeronasal type 1 receptor C5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053235.2NP_444465.2  vomeronasal 1 receptor, C5

    See identical proteins and their annotated locations for NP_444465.2

    Status: VALIDATED

    Source sequence(s)
    AC153696
    Consensus CDS
    CCDS20176.1
    UniProtKB/TrEMBL
    F6MAK1, F6MAK6, G5E8I3
    Related
    ENSMUSP00000077924.2, ENSMUST00000078885.2
    Conserved Domains (1) summary
    pfam03402
    Location:29294
    V1R; Vomeronasal organ pheromone receptor family, V1R

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    57186843..57187745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)