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CLGN calmegin [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113907788, updated on 15-Mar-2024

Summary

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Gene symbol
CLGN
Gene description
calmegin
See related
Ensembl:ENSBIXG00005009427
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 17
Exon count:
16
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 17 NC_040092.1 (55331787..55378523, complement)

Chromosome 17 - NC_040092.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113907785 Neighboring gene uncharacterized LOC113907787 Neighboring gene short coiled-coil protein Neighboring gene MGAT4 family member D Neighboring gene uncharacterized LOC113907790

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040092.1 Chromosome 17 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calmegin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040092.1 Reference UOA_Brahman_1

    Range
    55331787..55378523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027567401.1 → XP_027423202.1  calmegin

    UniProtKB/TrEMBL
    A0A4W2FCY6, A0A4W2FF57
    Related
    ENSBIXP00005003249.1, ENSBIXT00005010680.1

  2. XM_027567402.1 → XP_027423203.1  calmegin

    UniProtKB/TrEMBL
    A0A4W2FCY6, A0A4W2FF57
    Related
    ENSBIXP00005003241.1, ENSBIXT00005010703.1
Nucleotide Protein
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