U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ABCE1 ATP binding cassette subfamily E member 1 [ Bos indicus x Bos taurus (hybrid cattle) ]

Gene ID: 113907812, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ABCE1
Gene description
ATP binding cassette subfamily E member 1
See related
Ensembl:ENSBIXG00005008701
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos indicus x Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
100 current UOA_Brahman_1 (GCF_003369695.1) 17 NC_040092.1 (59513259..59545611)

Chromosome 17 - NC_040092.1Genomic Context describing neighboring genes Neighboring gene hedgehog interacting protein Neighboring gene anaphase promoting complex subunit 10 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC113907814 Neighboring gene OTU deubiquitinase 4 Neighboring gene 40S ribosomal protein S27-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_040092.1 Chromosome 17 Reference UOA_Brahman_1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosomal small subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ribosomal subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational termination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ATP-binding cassette sub-family E member 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bos indicus x Bos taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UOA_Brahman_1

Genomic

  1. NC_040092.1 Reference UOA_Brahman_1

    Range
    59513259..59545611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027567439.1 → XP_027423240.1  ATP-binding cassette sub-family E member 1

    UniProtKB/TrEMBL
    A0A4W2FAE5
    Related
    ENSBIXP00005002336.1, ENSBIXT00005012434.1
    Conserved Domains (1) summary
    COG1245
    Location:4 → 597
    Rli1; Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains [Translation, ribosomal structure and biogenesis]

  2. XM_027567441.1 → XP_027423242.1  ATP-binding cassette sub-family E member 1

    UniProtKB/TrEMBL
    A0A4W2FAE5
    Conserved Domains (1) summary
    COG1245
    Location:4 → 597
    Rli1; Translation initiation factor RLI1, contains Fe-S and AAA+ ATPase domains [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.